reset upstream subtrees to yocto 2.6

Reset the following subtrees on thud HEAD:

  poky: 87e3a9739d
  meta-openembedded: 6094ae18c8
  meta-security: 31dc4e7532
  meta-raspberrypi: a48743dc36
  meta-xilinx: c42016e2e6

Also re-apply backports that didn't make it into thud:
  poky:
    17726d0 systemd-systemctl-native: handle Install wildcards

  meta-openembedded:
    4321a5d libtinyxml2: update to 7.0.1
    042f0a3 libcereal: Add native and nativesdk classes
    e23284f libcereal: Allow empty package
    030e8d4 rsyslog: curl-less build with fmhttp PACKAGECONFIG
    179a1b9 gtest: update to 1.8.1

Squashed OpenBMC subtree compatibility updates:
  meta-aspeed:
    Brad Bishop (1):
          aspeed: add yocto 2.6 compatibility

  meta-ibm:
    Brad Bishop (1):
          ibm: prepare for yocto 2.6

  meta-ingrasys:
    Brad Bishop (1):
          ingrasys: set layer compatibility to yocto 2.6

  meta-openpower:
    Brad Bishop (1):
          openpower: set layer compatibility to yocto 2.6

  meta-phosphor:
    Brad Bishop (3):
          phosphor: set layer compatibility to thud
          phosphor: libgpg-error: drop patches
          phosphor: react to fitimage artifact rename

    Ed Tanous (4):
          Dropbear: upgrade options for latest upgrade
          yocto2.6: update openssl options
          busybox: remove upstream watchdog patch
          systemd: Rebase CONFIG_CGROUP_BPF patch

Change-Id: I7b1fe71cca880d0372a82d94b5fd785323e3a9e7
Signed-off-by: Brad Bishop <bradleyb@fuzziesquirrel.com>
diff --git a/poky/bitbake/lib/layerindexlib/cooker.py b/poky/bitbake/lib/layerindexlib/cooker.py
new file mode 100644
index 0000000..848f0e2
--- /dev/null
+++ b/poky/bitbake/lib/layerindexlib/cooker.py
@@ -0,0 +1,344 @@
+# Copyright (C) 2016-2018 Wind River Systems, Inc.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License version 2 as
+# published by the Free Software Foundation.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+# See the GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+
+import logging
+import json
+
+from collections import OrderedDict, defaultdict
+
+from urllib.parse import unquote, urlparse
+
+import layerindexlib
+
+import layerindexlib.plugin
+
+logger = logging.getLogger('BitBake.layerindexlib.cooker')
+
+import bb.utils
+
+def plugin_init(plugins):
+    return CookerPlugin()
+
+class CookerPlugin(layerindexlib.plugin.IndexPlugin):
+    def __init__(self):
+        self.type = "cooker"
+
+        self.server_connection = None
+        self.ui_module = None
+        self.server = None
+
+    def _run_command(self, command, path, default=None):
+        try:
+            result, _ = bb.process.run(command, cwd=path)
+            result = result.strip()
+        except bb.process.ExecutionError:
+            result = default
+        return result
+
+    def _handle_git_remote(self, remote):
+        if "://" not in remote:
+            if ':' in remote:
+                # This is assumed to be ssh
+                remote = "ssh://" + remote
+            else:
+                # This is assumed to be a file path
+                remote = "file://" + remote
+        return remote
+
+    def _get_bitbake_info(self):
+        """Return a tuple of bitbake information"""
+
+        # Our path SHOULD be .../bitbake/lib/layerindex/cooker.py
+        bb_path = os.path.dirname(__file__) # .../bitbake/lib/layerindex/cooker.py
+        bb_path = os.path.dirname(bb_path)  # .../bitbake/lib/layerindex
+        bb_path = os.path.dirname(bb_path)  # .../bitbake/lib
+        bb_path = os.path.dirname(bb_path)  # .../bitbake
+        bb_path = self._run_command('git rev-parse --show-toplevel', os.path.dirname(__file__), default=bb_path)
+        bb_branch = self._run_command('git rev-parse --abbrev-ref HEAD', bb_path, default="<unknown>")
+        bb_rev = self._run_command('git rev-parse HEAD', bb_path, default="<unknown>")
+        for remotes in self._run_command('git remote -v', bb_path, default="").split("\n"):
+            remote = remotes.split("\t")[1].split(" ")[0]
+            if "(fetch)" == remotes.split("\t")[1].split(" ")[1]:
+                bb_remote = self._handle_git_remote(remote)
+                break
+        else:
+            bb_remote = self._handle_git_remote(bb_path)
+
+        return (bb_remote, bb_branch, bb_rev, bb_path)
+
+    def _load_bblayers(self, branches=None):
+        """Load the BBLAYERS and related collection information"""
+
+        d = self.layerindex.data
+
+        if not branches:
+            raise LayerIndexFetchError("No branches specified for _load_bblayers!")
+
+        index = layerindexlib.LayerIndexObj()
+
+        branchId = 0
+        index.branches = {}
+
+        layerItemId = 0
+        index.layerItems = {}
+
+        layerBranchId = 0
+        index.layerBranches = {}
+
+        bblayers = d.getVar('BBLAYERS').split()
+
+        if not bblayers:
+            # It's blank!  Nothing to process...
+            return index
+
+        collections = d.getVar('BBFILE_COLLECTIONS')
+        layerconfs = d.varhistory.get_variable_items_files('BBFILE_COLLECTIONS', d)
+        bbfile_collections = {layer: os.path.dirname(os.path.dirname(path)) for layer, path in layerconfs.items()}
+
+        (_, bb_branch, _, _) = self._get_bitbake_info()
+
+        for branch in branches:
+            branchId += 1
+            index.branches[branchId] = layerindexlib.Branch(index, None)
+            index.branches[branchId].define_data(branchId, branch, bb_branch)
+
+        for entry in collections.split():
+            layerpath = entry
+            if entry in bbfile_collections:
+                layerpath = bbfile_collections[entry]
+
+            layername = d.getVar('BBLAYERS_LAYERINDEX_NAME_%s' % entry) or os.path.basename(layerpath)
+            layerversion = d.getVar('LAYERVERSION_%s' % entry) or ""
+            layerurl = self._handle_git_remote(layerpath)
+
+            layersubdir = ""
+            layerrev = "<unknown>"
+            layerbranch = "<unknown>"
+
+            if os.path.isdir(layerpath):
+                layerbasepath = self._run_command('git rev-parse --show-toplevel', layerpath, default=layerpath)
+                if os.path.abspath(layerpath) != os.path.abspath(layerbasepath):
+                    layersubdir = os.path.abspath(layerpath)[len(layerbasepath) + 1:]
+
+                layerbranch = self._run_command('git rev-parse --abbrev-ref HEAD', layerpath, default="<unknown>")
+                layerrev = self._run_command('git rev-parse HEAD', layerpath, default="<unknown>")
+
+                for remotes in self._run_command('git remote -v', layerpath, default="").split("\n"):
+                    if not remotes:
+                        layerurl = self._handle_git_remote(layerpath)
+                    else:
+                        remote = remotes.split("\t")[1].split(" ")[0]
+                        if "(fetch)" == remotes.split("\t")[1].split(" ")[1]:
+                            layerurl = self._handle_git_remote(remote)
+                            break
+
+            layerItemId += 1
+            index.layerItems[layerItemId] = layerindexlib.LayerItem(index, None)
+            index.layerItems[layerItemId].define_data(layerItemId, layername, description=layerpath, vcs_url=layerurl)
+
+            for branchId in index.branches:
+                layerBranchId += 1
+                index.layerBranches[layerBranchId] = layerindexlib.LayerBranch(index, None)
+                index.layerBranches[layerBranchId].define_data(layerBranchId, entry, layerversion, layerItemId, branchId,
+                                               vcs_subdir=layersubdir, vcs_last_rev=layerrev, actual_branch=layerbranch)
+
+        return index
+
+
+    def load_index(self, url, load):
+        """
+            Fetches layer information from a build configuration.
+
+            The return value is a dictionary containing API,
+            layer, branch, dependency, recipe, machine, distro, information.
+
+            url type should be 'cooker'.
+            url path is ignored
+        """
+
+        up = urlparse(url)
+
+        if up.scheme != 'cooker':
+            raise layerindexlib.plugin.LayerIndexPluginUrlError(self.type, url)
+
+        d = self.layerindex.data
+
+        params = self.layerindex._parse_params(up.params)
+
+        # Only reason to pass a branch is to emulate them...
+        if 'branch' in params:
+            branches = params['branch'].split(',')
+        else:
+            branches = ['HEAD']
+
+        logger.debug(1, "Loading cooker data branches %s" % branches)
+
+        index = self._load_bblayers(branches=branches)
+
+        index.config = {}
+        index.config['TYPE'] = self.type
+        index.config['URL'] = url
+
+        if 'desc' in params:
+            index.config['DESCRIPTION'] = unquote(params['desc'])
+        else:
+            index.config['DESCRIPTION'] = 'local'
+
+        if 'cache' in params:
+            index.config['CACHE'] = params['cache']
+
+        index.config['BRANCH'] = branches
+
+        # ("layerDependencies", layerindexlib.LayerDependency)
+        layerDependencyId = 0
+        if "layerDependencies" in load:
+            index.layerDependencies = {}
+            for layerBranchId in index.layerBranches:
+                branchName = index.layerBranches[layerBranchId].branch.name
+                collection = index.layerBranches[layerBranchId].collection
+
+                def add_dependency(layerDependencyId, index, deps, required):
+                    try:
+                        depDict = bb.utils.explode_dep_versions2(deps)
+                    except bb.utils.VersionStringException as vse:
+                        bb.fatal('Error parsing LAYERDEPENDS_%s: %s' % (c, str(vse)))
+
+                    for dep, oplist in list(depDict.items()):
+                        # We need to search ourselves, so use the _ version...
+                        depLayerBranch = index.find_collection(dep, branches=[branchName])
+                        if not depLayerBranch:
+                            # Missing dependency?!
+                            logger.error('Missing dependency %s (%s)' % (dep, branchName))
+                            continue
+
+                        # We assume that the oplist matches...
+                        layerDependencyId += 1
+                        layerDependency = layerindexlib.LayerDependency(index, None)
+                        layerDependency.define_data(id=layerDependencyId,
+                                        required=required, layerbranch=layerBranchId,
+                                        dependency=depLayerBranch.layer_id)
+
+                        logger.debug(1, '%s requires %s' % (layerDependency.layer.name, layerDependency.dependency.name))
+                        index.add_element("layerDependencies", [layerDependency])
+
+                    return layerDependencyId
+
+                deps = d.getVar("LAYERDEPENDS_%s" % collection)
+                if deps:
+                    layerDependencyId = add_dependency(layerDependencyId, index, deps, True)
+
+                deps = d.getVar("LAYERRECOMMENDS_%s" % collection)
+                if deps:
+                    layerDependencyId = add_dependency(layerDependencyId, index, deps, False)
+
+        # Need to load recipes here (requires cooker access)
+        recipeId = 0
+        ## TODO: NOT IMPLEMENTED
+        # The code following this is an example of what needs to be
+        # implemented.  However, it does not work as-is.
+        if False and 'recipes' in load:
+            index.recipes = {}
+
+            ret = self.ui_module.main(self.server_connection.connection, self.server_connection.events, config_params)
+
+            all_versions = self._run_command('allProviders')
+
+            all_versions_list = defaultdict(list, all_versions)
+            for pn in all_versions_list:
+                for ((pe, pv, pr), fpath) in all_versions_list[pn]:
+                    realfn = bb.cache.virtualfn2realfn(fpath)
+
+                    filepath = os.path.dirname(realfn[0])
+                    filename = os.path.basename(realfn[0])
+
+                    # This is all HORRIBLY slow, and likely unnecessary
+                    #dscon = self._run_command('parseRecipeFile', fpath, False, [])
+                    #connector = myDataStoreConnector(self, dscon.dsindex)
+                    #recipe_data = bb.data.init()
+                    #recipe_data.setVar('_remote_data', connector)
+
+                    #summary = recipe_data.getVar('SUMMARY')
+                    #description = recipe_data.getVar('DESCRIPTION')
+                    #section = recipe_data.getVar('SECTION')
+                    #license = recipe_data.getVar('LICENSE')
+                    #homepage = recipe_data.getVar('HOMEPAGE')
+                    #bugtracker = recipe_data.getVar('BUGTRACKER')
+                    #provides = recipe_data.getVar('PROVIDES')
+
+                    layer = bb.utils.get_file_layer(realfn[0], self.config_data)
+
+                    depBranchId = collection_layerbranch[layer]
+
+                    recipeId += 1
+                    recipe = layerindexlib.Recipe(index, None)
+                    recipe.define_data(id=recipeId,
+                                   filename=filename, filepath=filepath,
+                                   pn=pn, pv=pv,
+                                   summary=pn, description=pn, section='?',
+                                   license='?', homepage='?', bugtracker='?',
+                                   provides='?', bbclassextend='?', inherits='?',
+                                   blacklisted='?', layerbranch=depBranchId)
+
+                    index = addElement("recipes", [recipe], index)
+
+        # ("machines", layerindexlib.Machine)
+        machineId = 0
+        if 'machines' in load:
+            index.machines = {}
+
+            for layerBranchId in index.layerBranches:
+                # load_bblayers uses the description to cache the actual path...
+                machine_path = index.layerBranches[layerBranchId].layer.description
+                machine_path = os.path.join(machine_path, 'conf/machine')
+                if os.path.isdir(machine_path):
+                    for (dirpath, _, filenames) in os.walk(machine_path):
+                        # Ignore subdirs...
+                        if not dirpath.endswith('conf/machine'):
+                            continue
+                        for fname in filenames:
+                            if fname.endswith('.conf'):
+                                machineId += 1
+                                machine = layerindexlib.Machine(index, None)
+                                machine.define_data(id=machineId, name=fname[:-5],
+                                                    description=fname[:-5],
+                                                    layerbranch=index.layerBranches[layerBranchId])
+
+                                index.add_element("machines", [machine])
+
+        # ("distros", layerindexlib.Distro)
+        distroId = 0
+        if 'distros' in load:
+            index.distros = {}
+
+            for layerBranchId in index.layerBranches:
+                # load_bblayers uses the description to cache the actual path...
+                distro_path = index.layerBranches[layerBranchId].layer.description
+                distro_path = os.path.join(distro_path, 'conf/distro')
+                if os.path.isdir(distro_path):
+                    for (dirpath, _, filenames) in os.walk(distro_path):
+                        # Ignore subdirs...
+                        if not dirpath.endswith('conf/distro'):
+                            continue
+                        for fname in filenames:
+                            if fname.endswith('.conf'):
+                                distroId += 1
+                                distro = layerindexlib.Distro(index, None)
+                                distro.define_data(id=distroId, name=fname[:-5],
+                                                    description=fname[:-5],
+                                                    layerbranch=index.layerBranches[layerBranchId])
+
+                                index.add_element("distros", [distro])
+
+        return index